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mega4 program  (DNASTAR)


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    DNASTAR mega4 program
    Mega4 Program, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/program+mega4/mega+4+0/pm28457984-53-18-25
    Average 90 stars, based on 1 article reviews
    mega4 program - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: High sequence conservation among Odotoglossum ringspot virus isolates from orchids.
    Article Snippet: The variability in the nucleotide (nt) and amino acid (aa) sequences of the coat protein (CP) of Odontoglossum ringspot virus (ORSV), which naturally infects orchids worldwide, was investigated.. The CP genes of 48 ORSV isolates originating from different locations in Korea were amplified using RT-PCR and sequenced.. The encoded CP consists of 158 aa.

    Software:

    Article Title: Screening and characterization of a novel thermostable lipase with detergent-additive potential from the metagenomic library of a mangrove soil.
    Article Snippet: One clone (Lip906) exhibiting lipase activity was screened from a metagenomic library by using a medium containing tricaprylin.. A novel lipase gene from the inserted fragment of Lip906 was obtained by sequencing.. The phylogenetic analysis of Lip906 lipase exhibited 34% and 32% homologue to lipases from Streptomyces sp. MspMP-M5 and Rhodopirellula europaea.

    Sequencing:

    Article Title: Evidence for Occurrence of Human group B rotavirus in Central India Based on Characterization of NSP2 Gene
    Article Snippet: .. Sequence analysis of the sample was carried out using multiple alignment program MEGA4 and DNASTAR (CLUSTAL W). ..

    Article Title: Evidence for Occurrence of Human group B rotavirus in Central India Based on Characterization of NSP2 Gene
    Article Snippet: .. Sequence Analysis Sequence analysis of the sample was carried out using multiple alignment program MEGA4 and DNASTAR (CLUSTAL W). ..



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    mega4 program  (DNASTAR)
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    DNASTAR mega4 program
    Mega4 Program, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/program+mega4/mega+4+0/pm28457984-53-18-25
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    mega4 program  (Biodesign International Inc)
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    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
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    multiple alignment program mega4  (DNASTAR)
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    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
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    program mega4  (Amura Ltd)
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    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
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    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).

    Journal: Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology

    Article Title: Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile

    doi: 10.1007/s10577-012-9322-z

    Figure Lengend Snippet: Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).

    Article Snippet: Sequence diversity of two different MDL-ERV populations (cloned from the genomic DNAs of the C57BL/6J and Mus caroli/EiJ mice) was analyzed using the MEGA4 (Build 4028) program (The Biodesign Institute, Tempe, AZ) ( Tamura et al. 2007 ).

    Techniques: